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This page lists open-access metabolomics-related databases.

Databases in need of a short page & description

  • Biological Magnetic Resonance Data Bank
  • Birmingham Metabolite Library collection of 3328 experimental 1D and 2D J-resolved NMR spectra of 208 metabolite standards.
  • Biological Magnetic Resonance Data Bank: A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
  • Golm Metabolome Database (GMD) Data sets for biologically active metabolites quantified using GC-MS; MS data and text search capabilities.
  • Glycan Mass Spectral Database (GMDB) Database of MS spectra data for N- and O-linked glycans and glycolipids glycans along with their partial chemical structures.
  • LIPID MAPS Structure Database (LMSD) The LIPID MAPS Structure Database (LMSD) is comprised of structures and annotations of biologically relevant lipids, and includes representative examples from each category of the LIPID MAPS Lipid Classification System.
  • LIPID MAPS Proteome Database (LMPD) Lipid-associated protein sequences with annotations from UniProt, EntrezGene, ENZYME, GO, KEGG and other public resources. Browse or search by species, lipid class association, and/or keywords.
  • Madison Metabolomics Consortium Database MS and NMR data sets
  • Mass Spectral Library Extensive collection of data sets (EI MS, MS/MS, Replicate spectra, Retention index).
  • MoNA: MassBank of North America MassBank of North America (MoNA) is a metadata-centric, auto-curating repository designed for efficient storage and querying of mass spectral records
  • MetabolomeExpress Private and public repository of un-curated/curated metabolomics data; Interactive tools for data visualization, processing and statistical analysis.
  • Spectral Database System (SDBS) Repository of spectral database of organic compound; Variety of data sets (MS, NMR, IR, Raman, ESR).