Difference between revisions of "Databases"
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[https://massive.ucsd.edu/ProteoSAFe/static/massive.jsp '''MassIVE''']: a community resource developed by the NIH-funded Center for Computational Mass Spectrometry to promote the global, free exchange of mass spectrometry data. | [https://massive.ucsd.edu/ProteoSAFe/static/massive.jsp '''MassIVE''']: a community resource developed by the NIH-funded Center for Computational Mass Spectrometry to promote the global, free exchange of mass spectrometry data. | ||
− | [https://www.ebi.ac.uk/metabolights/ MetaboLights]: an open access repository for storage of metabolomics data. Users are encouraged to upload data from multiple species and techniques. | + | [https://www.ebi.ac.uk/metabolights/ '''MetaboLights''']: an open access repository for storage of metabolomics data. Users are encouraged to upload data from multiple species and techniques. |
− | [https://www.metabolome-express.org/ MetabolomeExpress]: private and public repository of un-curated/curated metabolomics data; Interactive tools for data visualization, processing and statistical analysis. | + | [https://www.metabolome-express.org/ '''MetabolomeExpress''']: private and public repository of un-curated/curated metabolomics data; Interactive tools for data visualization, processing and statistical analysis. |
=Reference databases= | =Reference databases= |
Revision as of 06:00, 18 May 2021
This page lists open-access metabolomics-related databases. Databases are roughly categorized whether they are a repository for raw/processed metabolomics data, provide reference spectra (experimentally or computationally derived) or principally provide curation/ontology of structures/pathways.
Metabolomic repositories
MassIVE: a community resource developed by the NIH-funded Center for Computational Mass Spectrometry to promote the global, free exchange of mass spectrometry data.
MetaboLights: an open access repository for storage of metabolomics data. Users are encouraged to upload data from multiple species and techniques.
MetabolomeExpress: private and public repository of un-curated/curated metabolomics data; Interactive tools for data visualization, processing and statistical analysis.
Reference databases
Biological Magnetic Resonance Data Bank
Madison Metabolomics Consortium Database
NIST Standard Reference Database
Spectral Database for Organic Compounds